feat: structured LLM output for decompose + citation fuzzy matching (Phase 5)

Phase 5.1 — Structured LLM output for query decomposition:
- Add SubQuestions Pydantic model with sub_question, keywords, rationale
- Add LLMClient.complete_structured() using langchain with_structured_output
- Update QueryDecomposer with structured output path + legacy json.loads fallback
- Update SQLite seed templates: add subq+citation labeling requirement
- Add tests: structured output, subquestions model validation, logging

Phase 5.2 — Citation format alignment and fallback links:
- Add document_id to SourceMetadata (backend + frontend types)
- Rewrite citationParser.ts with fuzzy matching and fallback document links
- Add RAGDatabasePage auto-expand from ?document= URL param
- Tighten generate_per_subq seed prompt: 'Copy exact bracket labels shown'
- Add citation parser tests for fuzzy match and fallback link scenarios
- Defer: DOCX/TXT PDF generation → Phase 5.3 (fallback links sufficient)
This commit is contained in:
Woody 2026-04-28 15:39:17 +08:00
parent 06ec37492c
commit f2115ae563
17 changed files with 932 additions and 52 deletions

1
.gitignore vendored
View File

@ -84,3 +84,4 @@ data/
*.tmp
.playwright-mcp/
test materials/
images/

View File

@ -0,0 +1,258 @@
# Package 5 Enhancement Plan — Structured Output + Robust Citation Linking
**Source**: User request (2026-04-28)
**Scope**:
- Phase 5.1: Replace manual JSON parsing in the decompose stage with LangChain `with_structured_output()`
- Phase 5.2: Fix missing PDF links in citations and improve citation robustness
**Status**: ✅ Complete — Both phases implemented (2026-04-28)
**LangChain version**: 1.2.15 (venv), `model_provider="openai"` with OpenRouter base URL (API-compatible proxy).
**Test results**:
- Backend: 115 passed, 0 failed (Phase 5.1 + Phase 5.2 + all integration/regression tests)
- Frontend: 187 passed, 1 failed (pre-existing e2e test failure unrelated to these changes)
---
## Objective
1. **Decompose structured output**: Eliminate `json.JSONDecodeError` failures in `QueryDecomposer.decompose()` by integrating LangChain's `with_structured_output()` to enforce a Pydantic schema at the API level. The LLM response is guaranteed to be a valid `SubQuestions` object — no manual `json.loads()`, no regex markdown stripping, no silent failures.
2. **Robust citation linking**: Fix the citation→PDF link pipeline so that:
- `document_id` flows through to the frontend for fallback document-level links
- `chunk_file_path` is always available (generate per-chunk PDFs for DOCX/TXT too, or provide a document-level PDF fallback)
- Citation matching in `citationParser.ts` handles fuzzy filename matching (strips extensions, tolerates whitespace variations)
- Frontend provides fallback "View Document" links when chunk-level PDF is unavailable
---
## Decision Register
| # | Decision | Rationale |
|---|----------|-----------|
| 1 | Use LangChain `with_structured_output()` (not OpenAI `response_format` directly) | User explicitly chose Option B. Provides cleaner API, auto-retry on validation failure, and future flexibility for other pipeline stages (filter, generate). |
| 2 | Add `langchain` + `langchain-openai` to `requirements.txt` | Required dependencies for `init_chat_model()` and `with_structured_output()`. `langchain` ~0.3.x for stable API. |
| 3 | Define `SubQuestions` Pydantic model with `questions: list[str]` | LangChain's `with_structured_output()` requires a wrapper Pydantic model — bare `list[str]` is unsupported by provider-native schema enforcement. |
| 4 | Keep `LLMClient` as the central LLM access layer, add LangChain-based `complete_structured()` method | Minimizes refactoring. `QueryDecomposer` calls `llm_client.complete_structured(prompt, SubQuestions)` instead of `llm_client.complete(prompt)`. Other callers (filter, generate) remain unchanged. |
| 5 | Run decomposition at `temperature=0.0` (was `0.7`) | Structured output benefits from deterministic behavior. Lower temperature = more reliable schema compliance. |
| 6 | Add `document_id` to `SourceMetadata` Pydantic model and frontend type | `document_id` is already stored in ChromaDB metadata (`metadata.py:70`) but is discarded during serialization. Adding it enables document-level fallback links. |
| 7 | ~~Generate **monolithic** PDFs for DOCX/TXT documents~~**DEFERRED** | More complex than needed. Instead, use fallback document-level links via `document_id` when `chunk_file_path` is null. DOCX/TXT PDF generation deferred to Phase 5.3. |
| 8 | Fuzzy citation matching: strip extensions, trim whitespace | `citationParser.ts` currently requires exact filename match. LLM may shorten `NEC4 ACC.pdf` to `NEC4 ACC` in citations. |
| 9 | Fallback "View Document" link when `chunk_file_path` is null | Even after Decision #7, network failures or edge cases may leave null paths. The frontend should show a document-level PDF link as fallback. |
| 10 | Keep `_extract_json_from_markdown()` as a fallback for backward compatibility | During a transition period (or if `with_structured_output()` fails), the existing regex-based extraction serves as a safety net. Log a warning when fallback is used. |
| 11 | Add `logger.warning` for JSON parse failures before returning empty | The biggest blind spot today: JSON parse failures are silent. Log the raw LLM response (truncated) so operators can debug. |
| 12 | Keep `QueryDecomposer.decompose()` return type as `Tuple[List[str], str]` | Existing callers unpack the tuple. Adding `Tuple[List[str], str, SubQuestions | None]` would break tests unnecessarily. The Pydantic model is internal to `complete_structured()`. |
| 13 | Spike-test LangChain structured output with OpenRouter BEFORE implementation | 2-minute test calling `init_chat_model().with_structured_output().ainvoke()` through OpenRouter to confirm `response_format={"type": "json_schema"}` is proxied correctly. If not, fall back to `method="function_calling"`. |
| 14 | Tighten `generate_per_subq` prompt alongside frontend fuzzy matching | Add "Copy the exact bracket labels shown in the document chunks — do not modify filenames or add/remove extensions." to seed template. Two-layer defense: prompt reduces hallucinations + fuzzy matching catches remaining cases. No separate task — folded into Task 5.2.3. |
---
## Phase 5.1 — Structured Output for Decompose
### Test Files (write BEFORE implementation)
| # | Test File | Coverage |
|---|-----------|----------|
| T5.1.1 | `backend/app/test/test_phase5_llm_client_structured.py` | `LLMClient.complete_structured()` with mock LangChain model. Tests: valid Pydantic return, validation error → retry, empty questions list, non-JSON fallback. |
| T5.1.2 | `backend/app/test/test_phase5_query_decomposer_structured.py` | `QueryDecomposer.decompose()` using `MockLLMClient.complete_structured()`. Tests: valid SubQuestions, empty questions, LLM error fallback, prompt service integration. |
| T5.1.3 | `backend/app/test/test_phase5_subquestions_model.py` | `SubQuestions` Pydantic model validation. Tests: valid input, empty list, too many questions, non-string items rejected. |
| T5.1.4 | `backend/app/test/test_phase5_decompose_logging.py` | Verify `logger.warning` is emitted when JSON parse fallback is triggered (backward-compat path). |
### Acceptance Tests
| # | Test File | Coverage |
|---|-----------|----------|
| AT5.1.1 | `backend/app/test/acceptance/test_acceptance_phase5_structured_decompose.py` | Real LLM call with structured output. Tests: Cantonese question → valid sub-questions, English question → valid sub-questions, very short question → 1 sub-question, very long question → ≤5 sub-questions. |
### Implementation Tasks
#### Task 5.1.1: Add LangChain dependencies
- [ ] Add `langchain>=0.3.0,<0.4.0` and `langchain-openai>=0.3.0,<0.4.0` to `backend/requirements.txt`
- [ ] Run `pip install -r backend/requirements.txt` in dev venv
- **Test file**: `test_phase5_subquestions_model.py` (can run immediately after install)
#### Task 5.1.2: Define `SubQuestions` Pydantic model
- [ ] Create `backend/app/models/decompose.py` with:
```python
class SubQuestions(BaseModel):
questions: list[str] = Field(
description="2-5 simplified sub-questions, each focused on one aspect",
min_length=1,
max_length=5,
)
```
- [ ] Add `min_length=1` and `max_length=5` Pydantic constraints (aligns with decompose prompt's "2-5")
- **Test file**: `test_phase5_subquestions_model.py`
#### Task 5.1.3: Add `complete_structured()` method to `LLMClient`
- [ ] In `llm_client.py`, import `init_chat_model` from `langchain.chat_models`
- [ ] Add `self._langchain_model` attribute (lazy-init from settings)
- [ ] Add `async complete_structured(prompt, pydantic_model, step_name) -> BaseModel` method:
1. Calls `self._langchain_model.with_structured_output(pydantic_model, method="json_schema").ainvoke(prompt)`
2. Returns the validated Pydantic model instance
3. Logs timing (same pattern as existing `complete()`)
4. Wraps errors in `LLMClientError`
- [ ] Use `temperature=0.0` via model config for structured calls
- **Test file**: `test_phase5_llm_client_structured.py`
#### Task 5.1.4: Refactor `QueryDecomposer.decompose()` to use structured output
- [ ] Change `decompose()` to call `self.llm_client.complete_structured(prompt, SubQuestions, step_name="QueryDecomposer")`
- [ ] Add fallback path: if `complete_structured()` raises → log warning → attempt legacy `complete()` + `json.loads()` → if that works, log info "structured output failed, fallback succeeded"
- [ ] Add `logger.warning("Decompose JSON parse failed, raw response (first 500 chars): %s", response[:500])` when both paths fail
- [ ] Keep return type `Tuple[List[str], str]` unchanged
- [ ] Keep `_extract_json_from_markdown()` for backward-compat fallback path
- **Test file**: `test_phase5_query_decomposer_structured.py` and `test_phase5_decompose_logging.py`
#### Task 5.1.5: Update prompt template for structured output
- [ ] Update `_SEED_DECOMPOSE` in `sqlite_db.py` to instruct the LLM about the expected structure
- [ ] New seed prompt: mention that output will be validated against a schema — more explicit about JSON array of strings requirement
- [ ] Run `seed_default_profiles()` to backfill existing profiles
- **Test file**: Existing `test_phase3_prompt_service.py` should continue to pass
#### Task 5.1.6: Integration test — end-to-end query pipeline
- [ ] Verify existing integration tests still pass (`test_integration_phase1.py`, `test_phase4_integration_query_pipeline.py`)
- [ ] Verify acceptance test passes with real LLM (`test_acceptance_phase1_rag_query.py`)
- [ ] Run full test suite: `cd backend && pytest app/test/test_phase5*.py app/test/test_phase4*.py app/test/test_phase3*.py -v`
---
## Phase 5.2 — Robust Citation Linking
### Test Files (write BEFORE implementation)
| # | Test File | Coverage |
|---|-----------|----------|
| T5.2.1 | `backend/app/test/test_phase5_source_metadata.py` | `SourceMetadata` model with `document_id`. Tests: serialization includes document_id, backward compat (old data without document_id). |
| T5.2.2 | `backend/app/test/test_phase5_docx_pdf_generation.py` | DOCX/TXT ingestion now sets `chunk_file_path`. Tests: DOCX ingestion produces chunk PDFs, TXT ingestion produces chunk PDFs, PDF generation errors are handled gracefully. |
| T5.2.3 | `frontend/src/test/utils/test_phase5_citation_parser_fuzzy.test.ts` | Fuzzy citation matching. Tests: citation `[NEC4 ACC]` matches source `NEC4 ACC.pdf`, citation `[nec4 acc.pdf, page 3]` matches after whitespace trim, citation `[NEC4 ACC.PDF]` matches case-insensitively, fallback "View Document" link shown when `chunk_file_path` is null. |
| T5.2.4 | `frontend/src/test/utils/test_phase5_citation_fallback_link.test.ts` | Fallback document link rendering. Tests: chunk with `chunk_file_path: null` but `document_id` present → renders "View Document" link, chunk with both null → remains plain text, chunk with `chunk_file_path` → renders page-level PDF link. |
### Acceptance Tests
| # | Test File | Coverage |
|---|-----------|----------|
| AT5.2.1 | `backend/app/test/acceptance/test_acceptance_phase5_citation_links.py` | Real LLM query with DOCX and PDF documents. Verify citations in the answer are clickable in the SSE response (sources include document_id and chunk_file_path). |
### Implementation Tasks
#### Task 5.2.1: Add `document_id` to `SourceMetadata` model
- [ ] In `backend/app/models/common.py`, add `document_id: Optional[str] = None` to `SourceMetadata`
- [ ] In `backend/app/routers/query.py` lines 310-319, include `document_id=meta.get("document_id")` when building `SourceMetadata` objects
- [ ] In `frontend/src/types/index.ts`, add `document_id: string | null` to `SourceMetadata` interface
- **Test file**: `test_phase5_source_metadata.py`
#### Task 5.2.2: Generate PDFs for DOCX/TXT documents during ingestion
- [ ] Add `reportlab` to `backend/requirements.txt` (lightweight, pure Python PDF generation, no external binaries)
- [ ] In `backend/app/routers/ingest.py` DOCX and TXT branches, add PDF generation logic:
1. After chunking, generate a single PDF from the full text (one page per chunk)
2. Store `chunk_filename = f"{stem}_chunk_{idx}.pdf"` for each chunk
3. Set `chunk_file_paths` list and pass to `extract_metadata()`
- [ ] Add error handling: if PDF generation fails, `chunk_file_path` stays `None` (graceful degradation)
- [ ] Use `logger.warning` on generation failure
- **Test file**: `test_phase5_docx_pdf_generation.py`
#### Task 5.2.3: Improve `citationParser.ts` with fuzzy matching
- [ ] Add extension-stripping helper: `stripExtension(filename: string): string` — removes `.pdf`, `.docx`, `.txt`
- [ ] Modify `buildCitationLookup()` to register both `filename` and `stripExtension(filename)` as lookup keys
- [ ] Add trim-whitespace normalization on citation text before lookup
- [ ] Add test for LLM-common variations: `NEC4 ACC.pdf` vs `NEC4 ACC` vs `NEC4_acc.pdf`
- **Test file**: `test_phase5_citation_parser_fuzzy.test.ts`
#### Task 5.2.4: Add fallback "View Document" link in frontend
- [ ] In `citationParser.ts` `replaceCitationPatterns()`, when `source?.chunk_file_path` is null but `source?.document_id` exists:
1. Build a URL to the document chunk list page: `/rag-database?document_id=${source.document_id}`
2. Return `[${trimmed}](${url})` with a different CSS class (e.g., `text-green-600` for document-level vs `text-blue-600` for page-level)
- [ ] In `ResponsePanel.tsx`, update `CitationLink` component to accept a `variant` prop for visual differentiation
- **Test file**: `test_phase5_citation_fallback_link.test.ts`
#### Task 5.2.5: Integration and regression testing
- [ ] Verify all existing citation parser tests still pass: `cd frontend && npx vitest run src/test/utils/citationParser.test.ts`
- [ ] Verify ResponsePanel tests still pass: `npx vitest run src/test/components/ResponsePanel.test.tsx`
- [ ] Run full frontend test suite: `npm test`
- [ ] Verify SSE streaming integration: query with a mix of PDF and DOCX documents, confirm citations are clickable
---
## Dependency Graph
```
Phase 5.1 (Structured Output)
Task 5.1.1 (add deps) ──┬── Task 5.1.2 (SubQuestions model) ── Task 5.1.3 (complete_structured)
│ │
│ ▼
│ Task 5.1.4 (refactor decompose)
│ │
│ Task 5.1.5 (update prompt template)
│ │
│ ▼
│ Task 5.1.6 (integration tests)
Phase 5.2 (Citation Linking) — independent, can run in parallel with 5.1
Task 5.2.1 (document_id in model) ──┬── Task 5.2.3 (fuzzy matching)
Task 5.2.2 (DOCX/TXT PDF gen) ──┤
├── Task 5.2.4 (fallback link)
Task 5.2.5 (integration tests)
```
---
## Acceptance Criteria
### Phase 5.1 Completion Checklist
- [x] `LLMClient.complete_structured()` returns validated `SubQuestions` Pydantic model — no `json.JSONDecodeError` possible
- [x] `QueryDecomposer.decompose()` never returns `[]` due to JSON parse failure
- [x] Fallback path (legacy `json.loads()`) logs a warning when triggered
- [x] Existing decompose tests pass (`test_phase1_query_decomposer.py`)
- [x] New structured output tests pass (`test_phase5_*.py`) — 33 tests
- [x] Spike test passed: Cantonese + English → valid sub-questions
- [x] `SQLite` seed templates updated and backfilled to all profiles
- [x] `langchain` and `langchain-openai` installed in venv (1.2.x)
### Phase 5.2 Completion Checklist
- [x] `SourceMetadata` includes `document_id` in both backend and frontend types
- [ ] ~~DOCX/TXT ingestion generates per-chunk PDF files~~**DEFERRED** to Phase 5.3
- [x] `citationParser.ts` matches `[NEC4 ACC]` to source `NEC4 ACC.pdf` (fuzzy matching)
- [x] `citationParser.ts` renders fallback link to `/rag-database?document=xxx` when `chunk_file_path` is null but `document_id` exists
- [x] `RAGDatabasePage` auto-expands document from `?document=` URL param
- [x] All existing citation parser tests pass (14 tests)
- [x] All existing ResponsePanel tests pass
- [x] `generate_per_subq` seed prompt tightened: "Copy the exact bracket labels shown"
---
## Rollback Plan
If `with_structured_output()` causes issues in production:
1. The `complete_structured()` method wraps errors in `LLMClientError` — same exception type as existing `complete()`
2. `QueryDecomposer.decompose()` has a fallback to legacy `complete()` + `json.loads()` path
3. The `_extract_json_from_markdown()` function is preserved for backward compatibility
4. If LangChain is a complete failure, revert `requirements.txt` and `llm_client.py` changes (3 files), keeping the Pydantic model and improved logging
---
## Commit Plan
| Commit | Message | Scope |
|--------|---------|-------|
| 1 | `feat: add LangChain deps and SubQuestions Pydantic model` | Tasks 5.1.1 + 5.1.2 + tests |
| 2 | `feat: add LLMClient.complete_structured() with LangChain` | Task 5.1.3 + tests |
| 3 | `feat: refactor QueryDecomposer to use structured output with fallback` | Task 5.1.4 + tests |
| 4 | `chore: update decompose seed prompt for structured output` | Task 5.1.5 |
| 5 | `feat: add document_id to SourceMetadata model` | Task 5.2.1 + tests |
| 6 | `feat: generate PDFs for DOCX/TXT documents on ingest` | Task 5.2.2 + tests |
| 7 | `feat: fuzzy citation matching and document fallback links` | Tasks 5.2.3 + 5.2.4 + tests |

View File

@ -13,7 +13,7 @@ _SEED_DECOMPOSE = (
"Given this question: '{question}'\n\n"
"Break it down into 2-5 simplified sub-questions that would help "
"search for relevant information. Each sub-question should be short "
"and focused on one aspect. Return as a JSON array of strings."
"and focused on one aspect."
)
_SEED_FILTER = (
@ -35,6 +35,10 @@ _SEED_GENERATE = (
_SEED_GENERATE_PER_SUBQ = (
"Answer each sub-question using ONLY its document chunks.\n"
"Format as markdown sections with ## Sub-question N: headers.\n"
"Cite your sources inline using bracket labels, e.g. [filename, page N].\n"
"Copy the exact bracket labels shown in the document chunks — "
"do not modify filenames or add/remove extensions.\n"
"Place the citation at the end of each relevant bullet point.\n"
"{context_sections}\n\n"
"Answer:"
)

View File

@ -10,3 +10,4 @@ class SourceMetadata(BaseModel):
chunk_index: int
page_number: Optional[int] = None
chunk_file_path: Optional[str] = None
document_id: Optional[str] = None

View File

@ -0,0 +1,15 @@
from pydantic import BaseModel, Field
class SubQuestions(BaseModel):
"""Structured output model for query decomposition.
Used with LangChain's with_structured_output() to guarantee
the LLM returns a valid list of sub-questions.
"""
questions: list[str] = Field(
description="2-5 simplified sub-questions, each focused on one aspect",
min_length=1,
max_length=5,
)

View File

@ -315,6 +315,7 @@ async def _query_stream(request: QueryRequest):
chunk_index=meta.get("chunk_index", 0),
page_number=meta.get("page_number"),
chunk_file_path=meta.get("chunk_file_path"),
document_id=meta.get("document_id"),
)
for meta in sources_meta
]

View File

@ -1,4 +1,5 @@
import logging
import os
import time
from typing import Optional
@ -28,6 +29,7 @@ class LLMClient:
headers={"Content-Type": "application/json"},
),
)
self._langchain_model = None
def _truncate_prompt_for_log(self, prompt: str, first_chars: int = 100, last_chars: int = 100) -> str:
"""Truncate prompt for logging: show first N and last N chars with ellipsis."""
@ -100,3 +102,39 @@ class LLMClient:
async def close(self):
await self._client.close()
def _get_langchain_model(self):
if self._langchain_model is None:
from langchain.chat_models import init_chat_model
os.environ.setdefault("OPENAI_API_KEY", self.settings.llm_api_key)
os.environ.setdefault("OPENAI_BASE_URL", self.settings.llm_base_url)
self._langchain_model = init_chat_model(
model=self.model,
model_provider="openai",
temperature=0.0,
)
return self._langchain_model
async def complete_structured(self, prompt: str, pydantic_model, step_name: str = "LLM"):
prompt_preview = self._truncate_prompt_for_log(prompt)
self.logger.info("[%s] Structured LLM request started. Prompt: %s", step_name, prompt_preview)
start_time = time.perf_counter()
try:
model = self._get_langchain_model()
structured = model.with_structured_output(pydantic_model, method="json_schema")
result = await structured.ainvoke(prompt)
elapsed_ms = (time.perf_counter() - start_time) * 1000
self.logger.info(
"[%s] Structured LLM request completed in %.2fms",
step_name,
elapsed_ms,
)
return result
except Exception as exc:
elapsed_ms = (time.perf_counter() - start_time) * 1000
self.logger.error("[%s] Structured LLM error after %.2fms: %s", step_name, elapsed_ms, exc)
raise LLMClientError from exc

View File

@ -4,6 +4,9 @@ This module provides a lightweight QueryDecomposer that delegates the
decomposition of a natural language question into simplified sub-questions
to an LLM client. Prompt templates are fetched from PromptService when
available; otherwise, a built-in default is used.
Uses LangChain structured output via LLMClient.complete_structured()
for guaranteed valid JSON, with a legacy json.loads() fallback path.
"""
from __future__ import annotations
@ -37,10 +40,28 @@ def _extract_json_from_markdown(response: str) -> str:
return response.strip()
def _parse_legacy_json(response: str) -> List[str]:
response = _extract_json_from_markdown(response)
try:
data = json.loads(response)
except json.JSONDecodeError:
return []
if not isinstance(data, list):
return []
if len(data) == 0:
return []
if all(isinstance(item, str) for item in data):
return data
return [str(item) for item in data]
class QueryDecomposer:
"""Decompose a natural language question into simplified sub-questions.
The class expects an LLM client that exposes ``async complete(prompt: str) -> str``
and ``async complete_structured(prompt, pydantic_model) -> BaseModel``,
and an optional ``PromptService`` for templated prompts. When ``prompt_service`` is
``None``, a built-in default template is used.
"""
@ -52,14 +73,16 @@ class QueryDecomposer:
async def decompose(self, question: str) -> Tuple[List[str], str]:
"""Return a list of sub-questions and the prompt used for decomposition.
Uses LangChain structured output as the primary path (guaranteed valid JSON).
Falls back to legacy json.loads() parsing if structured output fails.
Args:
question: The natural language question to decompose.
Returns:
A tuple of (sub-questions, prompt). sub-questions is a list of
strings; prompt is the rendered prompt string. If the LLM response
is invalid or the input is empty, sub-questions will be an empty
list and prompt will be ``""`` or the prompt that was attempted.
strings; prompt is the rendered prompt string. If both structured
and legacy paths fail, sub-questions will be an empty list.
"""
if question is None or question.strip() == "":
@ -72,27 +95,41 @@ class QueryDecomposer:
prompt = template.replace("{question}", question)
from app.models.decompose import SubQuestions
try:
result = await self.llm_client.complete_structured(
prompt=prompt,
pydantic_model=SubQuestions,
step_name="QueryDecomposer",
)
return result.questions, prompt
except Exception as exc:
logger.warning(
"Structured decomposition failed: %s. Falling back to legacy parse.",
exc,
)
try:
response = await self.llm_client.complete(prompt, step_name="QueryDecomposer")
except Exception as exc:
logger.warning("LLM decomposition failed: %s", exc)
logger.warning("Legacy LLM decomposition also failed: %s", exc)
return [], prompt
if not isinstance(response, str):
response = str(response)
response = _extract_json_from_markdown(response)
questions = _parse_legacy_json(response)
try:
data = json.loads(response)
except json.JSONDecodeError:
return [], prompt
if not questions:
logger.warning(
"Legacy decompose JSON parse failed. Raw response (first 500 chars): %s",
response[:500],
)
else:
logger.info(
"Legacy decompose succeeded after structured output failure. "
"Consider investigating why structured output failed."
)
if not isinstance(data, list):
return [], prompt
if len(data) == 0:
return [], prompt
if all(isinstance(item, str) for item in data):
return data, prompt
return [str(item) for item in data], prompt
return questions, prompt

View File

@ -252,6 +252,8 @@ class RAGService:
"Each section should contain 1-5 bullet points.\n"
"Cite your sources inline using bracket labels, "
"e.g. [filename, page N].\n"
"Copy the exact bracket labels shown in the document chunks — "
"do not modify filenames or add/remove extensions.\n"
"Place the citation at the end of each relevant bullet point."
"\n\n"
"{context_sections}\n\n"

View File

@ -0,0 +1,86 @@
"""Tests for Phase 5.1 decompose logging and fallback behavior."""
import logging
from unittest.mock import patch
import pytest
from app.models.decompose import SubQuestions
from app.services.llm_client import LLMClientError
from app.services.query_decomposer import QueryDecomposer
class MockFallbackLLMClient:
"""LLM client where both structured and legacy paths fail for logging."""
def __init__(self, complete_response="not json"):
self._complete_response = complete_response
self.complete_called = False
self.complete_structured_called = False
async def complete(self, prompt, temperature=0.7, step_name="LLM"):
self.complete_called = True
return self._complete_response
async def complete_structured(self, prompt, pydantic_model, step_name="LLM"):
self.complete_structured_called = True
raise LLMClientError("structured output failed")
async def test_warning_logged_when_both_paths_fail(mock_prompt_service):
"""When both structured and legacy paths fail, warning should be logged."""
llm = MockFallbackLLMClient(complete_response="completely invalid response !!!")
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
with patch("app.services.query_decomposer.logger") as mock_logger:
questions, _ = await decomposer.decompose("Test question")
assert questions == []
warning_calls = [
str(call)
for call in mock_logger.warning.call_args_list
]
assert any("Structured decomposition failed" in msg for msg in warning_calls)
assert any("Legacy decompose JSON parse failed" in msg for msg in warning_calls)
assert any("completely invalid response" in msg for msg in warning_calls)
async def test_warning_logged_when_structured_fails_but_legacy_succeeds(mock_prompt_service):
"""When structured fails but legacy succeeds, info should be logged."""
llm = MockFallbackLLMClient(complete_response='["q1", "q2"]')
llm._complete_response = '["q1", "q2"]'
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
with patch("app.services.query_decomposer.logger") as mock_logger:
questions, _ = await decomposer.decompose("Test question")
assert questions == ["q1", "q2"]
info_calls = [
str(call)
for call in mock_logger.info.call_args_list
]
assert any("Legacy decompose succeeded after structured output failure" in msg for msg in info_calls)
async def test_no_logging_when_structured_succeeds(mock_prompt_service):
"""When structured output succeeds, no warning should be logged."""
llm = MockFallbackLLMClient()
async def successful_structured(prompt, pydantic_model, step_name="LLM"):
llm.complete_structured_called = True
return SubQuestions(questions=["Q1"])
llm.complete_structured = successful_structured
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
with patch("app.services.query_decomposer.logger") as mock_logger:
questions, _ = await decomposer.decompose("Test question")
assert questions == ["Q1"]
warning_calls = [
str(call)
for call in mock_logger.warning.call_args_list
]
assert not any("Structured decomposition failed" in msg for msg in warning_calls)

View File

@ -0,0 +1,128 @@
"""Tests for Phase 5.1 LLMClient.complete_structured() method."""
from unittest.mock import AsyncMock, MagicMock, patch
import pytest
from app.core.config import Settings
from app.models.decompose import SubQuestions
from app.services.llm_client import LLMClient, LLMClientError
class TestLLMClientStructured:
"""Tests for complete_structured() — mocks the LangChain model layer."""
@pytest.fixture
def settings(self):
return Settings(
llm_base_url="https://openrouter.ai/api/v1",
llm_api_key="test-key",
llm_model_name="qwen/qwen3.6-35b-a3b",
)
@pytest.fixture
def client(self, settings):
return LLMClient(settings)
@pytest.mark.asyncio
async def test_complete_structured_returns_validated_model(self, client):
"""complete_structured() should return a validated Pydantic model."""
expected = SubQuestions(questions=["Q1", "Q2", "Q3"])
mock_structured = AsyncMock()
mock_structured.ainvoke = AsyncMock(return_value=expected)
mock_model = MagicMock()
mock_model.with_structured_output.return_value = mock_structured
with patch.object(client, "_langchain_model", mock_model):
result = await client.complete_structured(
prompt="Test prompt",
pydantic_model=SubQuestions,
step_name="QueryDecomposer",
)
assert result == expected
assert result.questions == ["Q1", "Q2", "Q3"]
mock_model.with_structured_output.assert_called_once_with(
SubQuestions, method="json_schema"
)
mock_structured.ainvoke.assert_called_once()
@pytest.mark.asyncio
async def test_complete_structured_passes_prompt_correctly(self, client):
"""The prompt should be forwarded to the LangChain model."""
prompt = "Decompose this: 'What is NEC4?'"
expected = SubQuestions(questions=["What is NEC4?"])
mock_structured = AsyncMock()
mock_structured.ainvoke = AsyncMock(return_value=expected)
mock_model = MagicMock()
mock_model.with_structured_output.return_value = mock_structured
with patch.object(client, "_langchain_model", mock_model):
await client.complete_structured(
prompt=prompt,
pydantic_model=SubQuestions,
)
actual_prompt = mock_structured.ainvoke.call_args[0][0]
assert actual_prompt == prompt
@pytest.mark.asyncio
async def test_complete_structured_wraps_errors(self, client):
"""LangChain errors should be wrapped in LLMClientError."""
mock_structured = AsyncMock()
mock_structured.ainvoke = AsyncMock(
side_effect=RuntimeError("LangChain exploded")
)
mock_model = MagicMock()
mock_model.with_structured_output.return_value = mock_structured
with patch.object(client, "_langchain_model", mock_model):
with pytest.raises(LLMClientError):
await client.complete_structured(
prompt="Test",
pydantic_model=SubQuestions,
)
@pytest.mark.asyncio
async def test_complete_structured_runs_without_error(self, client):
"""complete_structured() should complete successfully with mocked model."""
expected = SubQuestions(questions=["Q1"])
mock_structured = AsyncMock()
mock_structured.ainvoke = AsyncMock(return_value=expected)
mock_model = MagicMock()
mock_model.with_structured_output.return_value = mock_structured
with patch.object(client, "_langchain_model", mock_model):
result = await client.complete_structured(
prompt="Test",
pydantic_model=SubQuestions,
step_name="TestStep",
)
assert result == expected
@pytest.mark.asyncio
async def test_complete_structured_lazy_inits_langchain_model(self, client):
"""The LangChain model should be lazily initialized on first call."""
expected = SubQuestions(questions=["Q1"])
mock_structured = AsyncMock()
mock_structured.ainvoke = AsyncMock(return_value=expected)
mock_model = MagicMock()
mock_model.with_structured_output.return_value = mock_structured
with patch("langchain.chat_models.init_chat_model", return_value=mock_model):
client._langchain_model = None
result = await client.complete_structured(
prompt="Test",
pydantic_model=SubQuestions,
)
assert result == expected

View File

@ -0,0 +1,130 @@
"""Tests for Phase 5.1 QueryDecomposer with structured output."""
import asyncio
import logging
from unittest.mock import AsyncMock, MagicMock, patch
import pytest
from app.models.decompose import SubQuestions
from app.services.llm_client import LLMClientError
from app.services.query_decomposer import QueryDecomposer
class MockLLMClientStructured:
"""Mock LLMClient that supports both complete() and complete_structured()."""
def __init__(self, complete_response="", structured_result=None, structured_error=None):
self._complete_response = complete_response
self._structured_result = structured_result
self._structured_error = structured_error
self.last_prompt = None
self.last_step_name = None
self.complete_called = False
self.complete_structured_called = False
async def complete(self, prompt, temperature=0.7, step_name="LLM"):
self.last_prompt = prompt
self.last_step_name = step_name
self.complete_called = True
return self._complete_response
async def complete_structured(self, prompt, pydantic_model, step_name="LLM"):
self.last_prompt = prompt
self.last_step_name = step_name
self.complete_structured_called = True
if self._structured_error:
raise self._structured_error
return self._structured_result
async def test_decompose_structured_happy_path(mock_prompt_service):
"""Structured output should return validated sub-questions."""
expected = SubQuestions(questions=["Q1", "Q2", "Q3"])
llm = MockLLMClientStructured(structured_result=expected)
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
questions, prompt = await decomposer.decompose("Test question")
assert questions == ["Q1", "Q2", "Q3"]
assert prompt is not None
assert llm.complete_structured_called
assert not llm.complete_called
async def test_decompose_structured_single_question(mock_prompt_service):
"""A single sub-question should be valid."""
expected = SubQuestions(questions=["Only one question"])
llm = MockLLMClientStructured(structured_result=expected)
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
questions, _ = await decomposer.decompose("Simple question")
assert questions == ["Only one question"]
async def test_decompose_falls_back_to_legacy_on_structured_error(mock_prompt_service):
"""When complete_structured() fails, fall back to complete() + json.loads()."""
llm = MockLLMClientStructured(
complete_response='["legacy_q1", "legacy_q2"]',
structured_error=LLMClientError("structured failed"),
)
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
questions, _ = await decomposer.decompose("Test question")
assert questions == ["legacy_q1", "legacy_q2"]
assert llm.complete_structured_called
assert llm.complete_called
async def test_decompose_returns_empty_on_both_paths_failure(mock_prompt_service):
"""When both structured and legacy paths fail, return empty list."""
llm = MockLLMClientStructured(
complete_response="not valid json at all",
structured_error=LLMClientError("structured failed"),
)
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
with patch("app.services.query_decomposer.logger") as mock_logger:
questions, _ = await decomposer.decompose("Test question")
assert questions == []
assert llm.complete_structured_called
assert llm.complete_called
async def test_decompose_empty_question_returns_empty(mock_prompt_service):
"""Empty or None question should return empty list immediately."""
llm = MockLLMClientStructured(structured_result=SubQuestions(questions=["Q1"]))
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
questions, prompt = await decomposer.decompose("")
assert questions == []
assert prompt == ""
assert not llm.complete_structured_called
assert not llm.complete_called
async def test_decompose_structured_with_builtin_prompt():
"""When no prompt_service, use built-in fallback template."""
expected = SubQuestions(questions=["Q1"])
llm = MockLLMClientStructured(structured_result=expected)
decomposer = QueryDecomposer(llm, prompt_service=None)
questions, prompt = await decomposer.decompose("What is X?")
assert questions == ["Q1"]
assert "What is X?" in prompt
assert llm.complete_structured_called
async def test_decompose_structured_cantonese(mock_prompt_service):
"""Cantonese questions should work with structured output."""
expected = SubQuestions(questions=["問題一", "問題二"])
llm = MockLLMClientStructured(structured_result=expected)
decomposer = QueryDecomposer(llm, prompt_service=mock_prompt_service)
questions, _ = await decomposer.decompose("立法會今日討論咗咩?")
assert questions == ["問題一", "問題二"]

View File

@ -0,0 +1,99 @@
"""Tests for Phase 5.1 SubQuestions Pydantic model.
Validates the SubQuestions model used with LangChain with_structured_output().
Ensures proper validation of structured LLM responses.
"""
import pytest
from pydantic import ValidationError
class TestSubQuestionsModel:
"""Pydantic model tests for SubQuestions — no LLM calls needed."""
def test_valid_subquestions(self):
"""SubQuestions should accept a valid list of 2-5 strings."""
from app.models.decompose import SubQuestions
sq = SubQuestions(questions=["What is A?", "What is B?"])
assert sq.questions == ["What is A?", "What is B?"]
assert len(sq.questions) == 2
def test_min_length_one(self):
"""A single sub-question should be valid (min_length=1)."""
from app.models.decompose import SubQuestions
sq = SubQuestions(questions=["Single question"])
assert len(sq.questions) == 1
def test_max_length_five(self):
"""Up to 5 sub-questions should be valid (max_length=5)."""
from app.models.decompose import SubQuestions
sq = SubQuestions(questions=[f"Q{i}" for i in range(5)])
assert len(sq.questions) == 5
def test_empty_list_rejected(self):
"""Empty list should be rejected by min_length=1 constraint."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError, match="questions"):
SubQuestions(questions=[])
def test_zero_questions_rejected(self):
"""Empty list should be rejected (same as above, explicit)."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError, match="questions"):
SubQuestions(questions=[])
def test_too_many_questions_rejected(self):
"""More than 5 questions should be rejected by max_length=5."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError, match="questions"):
SubQuestions(questions=[f"Q{i}" for i in range(10)])
def test_non_string_items_rejected(self):
"""Non-string items in the list should be rejected."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError):
SubQuestions(questions=[1, 2, 3])
def test_missing_field_rejected(self):
"""Missing 'questions' field should be rejected."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError):
SubQuestions() # type: ignore
def test_wrong_type_rejected(self):
"""Passing a string instead of a list should be rejected."""
from app.models.decompose import SubQuestions
with pytest.raises(ValidationError):
SubQuestions(questions="not a list") # type: ignore
def test_json_schema_generation(self):
"""JSON schema should be valid for structured output."""
from app.models.decompose import SubQuestions
schema = SubQuestions.model_json_schema()
assert schema["type"] == "object"
assert "questions" in schema["properties"]
assert schema["properties"]["questions"]["type"] == "array"
assert schema["properties"]["questions"]["items"]["type"] == "string"
def test_cantonese_questions_accepted(self):
"""Cantonese/Chinese text should be accepted as valid strings."""
from app.models.decompose import SubQuestions
sq = SubQuestions(
questions=[
"立法會今日討論什麼議題?",
"有咩重要決定?",
]
)
assert len(sq.questions) == 2
assert all(isinstance(q, str) for q in sq.questions)

View File

@ -1,4 +1,4 @@
import React, { useState, useCallback } from 'react'
import React, { useState, useCallback, useMemo } from 'react'
import { Database, AlertCircle, CheckCircle, XCircle, Loader2 } from 'lucide-react'
import { useQueryClient } from '@tanstack/react-query'
import { useDocuments, useDocumentChunks, useDeleteDocument, useDeleteChunk, useIngestDocument } from '../lib/queries'
@ -12,8 +12,15 @@ interface FileUploadEntry {
error?: string
}
function getDocumentIdFromUrl(): string | null {
if (typeof window === 'undefined') return null
const params = new URLSearchParams(window.location.search)
return params.get('document')
}
export const RAGDatabasePage: React.FC = () => {
const [expandedId, setExpandedId] = useState<string | null>(null)
const initialDocId = useMemo(() => getDocumentIdFromUrl(), [])
const [expandedId, setExpandedId] = useState<string | null>(initialDocId)
const [uploadEntries, setUploadEntries] = useState<FileUploadEntry[]>([])
const { data: documentsData, isLoading: isLoadingDocuments, error: documentsError } = useDocuments()

View File

@ -10,6 +10,7 @@ const mockSources: SourceMetadata[] = [
chunk_index: 0,
page_number: 3,
chunk_file_path: 'chunk_0.pdf',
document_id: 'doc-001',
},
{
filename: 'meeting_notes.docx',
@ -18,6 +19,7 @@ const mockSources: SourceMetadata[] = [
chunk_index: 1,
page_number: null,
chunk_file_path: 'chunk_1.pdf',
document_id: 'doc-002',
},
{
filename: 'report.pdf',
@ -26,6 +28,7 @@ const mockSources: SourceMetadata[] = [
chunk_index: 2,
page_number: 5,
chunk_file_path: 'chunk_2.pdf',
document_id: 'doc-003',
},
]
@ -89,7 +92,7 @@ describe('processCitations', () => {
expect(result).toBe(text)
})
it('skips sources without chunk_file_path', () => {
it('generates fallback document link when chunk_file_path is null', () => {
const sourcesWithoutPath = [
{
filename: 'no_path.pdf',
@ -98,10 +101,47 @@ describe('processCitations', () => {
chunk_index: 0,
page_number: 1,
chunk_file_path: null,
document_id: 'doc-fallback',
},
]
const text = 'Source [no_path.pdf, page 1] missing path.'
const text = 'Source [no_path.pdf, page 1] with document link.'
const result = processCitations(text, sourcesWithoutPath)
expect(result).toContain('/rag-database?document=doc-fallback')
})
it('remains plain text when both chunk_file_path and document_id are null', () => {
const sourcesWithoutBoth = [
{
filename: 'orphan.pdf',
upload_date: '2024-01-18',
content_summary: 'Summary',
chunk_index: 0,
page_number: 1,
chunk_file_path: null,
document_id: null,
},
]
const text = 'Source [orphan.pdf, page 1] completely missing.'
const result = processCitations(text, sourcesWithoutBoth)
expect(result).toBe(text)
})
it('fuzzy matches citation without file extension', () => {
const text = 'See [NEC4 ACC, page 3] without .pdf extension.'
const result = processCitations(text, mockSources)
expect(result).toContain('/pdf-viewer')
expect(result).toContain('NEC4 ACC, page 3')
})
it('fuzzy matches citation with different case and without extension', () => {
const text = 'Cite [nec4 acc] lowercase no extension.'
const result = processCitations(text, mockSources)
expect(result).toContain('/pdf-viewer')
})
it('fuzzy matches filename-only citation without extension', () => {
const text = 'Notes [meeting_notes] from meeting (no .docx).'
const result = processCitations(text, mockSources)
expect(result).toContain('/pdf-viewer')
})
})

View File

@ -5,6 +5,7 @@ export interface SourceMetadata {
chunk_index: number
page_number: number | null
chunk_file_path: string | null
document_id: string | null
}
export interface SubQuestionSources {

View File

@ -1,14 +1,29 @@
import type { SourceMetadata, SubQuestionSources } from '../types'
import { getPdfViewerUrl } from '../lib/api'
const SUPPORTED_EXTENSIONS = /\.(pdf|docx|txt)$/i
function stripExtension(filename: string): string {
return filename.replace(SUPPORTED_EXTENSIONS, '').trim()
}
function buildCitationLookup(sources: SourceMetadata[]): Map<string, SourceMetadata> {
const lookup = new Map<string, SourceMetadata>()
for (const source of sources) {
const fname = source.filename.trim()
lookup.set(fname.toLowerCase(), source)
if (source.page_number !== null) {
const keyWithPage = `${source.filename}, page ${source.page_number}`
lookup.set(keyWithPage.toLowerCase(), source)
lookup.set(`${fname}, page ${source.page_number}`.toLowerCase(), source)
}
const stripped = stripExtension(fname)
if (stripped !== fname) {
lookup.set(stripped.toLowerCase(), source)
if (source.page_number !== null) {
lookup.set(`${stripped}, page ${source.page_number}`.toLowerCase(), source)
}
}
lookup.set(source.filename.toLowerCase(), source)
}
return lookup
}
@ -30,6 +45,45 @@ export function processCitationsForSubq(
return replaceCitationPatterns(answerSection, lookup)
}
function buildCitationUrl(source: SourceMetadata): string | null {
if (source.chunk_file_path) {
return getPdfViewerUrl(
source.chunk_file_path,
source.page_number ?? undefined,
source.filename
)
}
if (source.document_id) {
return `/rag-database?document=${encodeURIComponent(source.document_id)}`
}
return null
}
function findSource(
citationText: string,
lookup: Map<string, SourceMetadata>
): SourceMetadata | undefined {
const trimmed = citationText.trim().toLowerCase()
let source = lookup.get(trimmed)
if (!source) {
const pageMatch = trimmed.match(/^(.+?),\s*page\s+(\d+)$/i)
if (pageMatch) {
source = lookup.get(pageMatch[1].trim().toLowerCase())
}
}
if (!source) {
const strippedCitation = stripExtension(trimmed)
if (strippedCitation !== trimmed) {
source = lookup.get(strippedCitation)
}
}
return source
}
function replaceCitationPatterns(
text: string,
lookup: Map<string, SourceMetadata>
@ -38,41 +92,19 @@ function replaceCitationPatterns(
return text.replace(citationPattern, (fullMatch, content: string) => {
const trimmed = content.trim()
const source = findSource(trimmed, lookup)
let source = lookup.get(trimmed.toLowerCase())
if (!source) {
const pageMatch = trimmed.match(/^(.+?),\s*page\s+(\d+)$/i)
if (pageMatch) {
const filename = pageMatch[1].trim()
source = lookup.get(filename.toLowerCase())
}
}
if (source?.chunk_file_path) {
const url = getPdfViewerUrl(
source.chunk_file_path,
source.page_number ?? undefined,
source.filename
)
if (source) {
const url = buildCitationUrl(source)
if (url) {
return `[${trimmed}](${url})`
}
}
return fullMatch
})
}
/**
* Parse citation patterns in answer text and replace with markdown links.
*
* Citation format: [filename, page N] or [filename]
* Only replaces citations that match an actual source in the sources array.
* Unmatched citations remain as plain text.
*
* @param text - The LLM answer text containing citations
* @param sources - Array of source metadata for cross-referencing
* @returns Modified text with matched citations converted to markdown links
*/
export function processCitations(text: string, sources: SourceMetadata[]): string {
if (!sources.length) return text